#include <Phys_LevelSet.h>
Inheritance diagram for mial::Phys_LevelSet< DataType, InputImageType, nDims, MType, VType >:
Public Types | |
| typedef Phys_LevelSet | Self |
|
typedef itk::SmartPointer< Self > | Pointer |
|
typedef itk::SmartPointer< const Self > | ConstPointer |
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typedef itk::WeakPointer< const Self > | ConstWeakPointer |
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typedef Physics< DataType, nDims, MType, VType >::Error | Error |
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typedef itk::Image< DataType, nDims > | InternalImageType |
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typedef Geometric< DataType, nDims >::BinaryImageType | BinaryImageType |
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typedef LevelSetDeformation< DataType, nDims, InternalImageType > | DeformationType |
| The type of deformation's used. Notice they must be of the same internal storage types and dimension as the physics class. | |
Public Member Functions | |
| virtual void | initializeDistanceImg () |
| virtual void | initializeEdgePotentialImg () |
| virtual bool | simulate () |
| Simulate the deformation dynamics. | |
| virtual bool | runDeformation (const std::string defName, typename DeformationType::deformationIn *const i, std::stringstream *const s=NULL) |
| Public member. Used by a behaviour to execute a particular deformation by name. | |
| virtual void | setExternalForces (void *) |
| Public pure virtual function for setting the external forces used during simulations of the deformation dynamics. | |
| virtual void | setInput (typename InputImageType::ConstPointer img) |
| Set the layer's input image. | |
| virtual void | setPropagationScaling (const double ps) |
| virtual void | setCurvatureScaling (const double cs) |
| virtual void | setAdvectionScaling (const double as) |
| virtual void | setMaximumRMSError (const double me) |
| virtual void | setNumIterations (const double ni) |
| virtual double | getPropagationScaling () |
| virtual double | getCurvatureScaling () |
| virtual double | getAdvectionScaling () |
| virtual double | getMaximumRMSError () |
| virtual double | getNumIterations () |
| void | printInternalValues () |
| InternalImageType::Pointer | getDistanceImage () |
| InternalImageType::Pointer | getEdgePotentialImage () |
| BinaryImageType::Pointer | getOutputImage () |
Protected Member Functions | |
| Phys_LevelSet () | |
A derived class of the physical ABC, this class provides the framework with the ability to simulate deformation dynamics using a geodesic active contour approach[1]. This class is considered to be relatively stable, in that additional functionality may be added but current functionality will remain.
[1] Vincent Caselles, Ron Kimmel, and Guillermo Sapiro. Geodesic active contours. In ICCV, pages 694699, 1995.
| DataType | The data type to be used for internal storage. | |
| InputImageType | The data type used for the input image | |
| nDims | The number of dimensions used for simulations. | |
| MType | The type of matrix used for internal storage. Defaults to vnl_matrix<Type>, the only supported type at this time. | |
| VType | The type of vector used for internal storage. Defaults to vnl_vector<Type>, the only supported type at this time. |
Definition at line 54 of file Phys_LevelSet.h.
| bool mial::Phys_LevelSet< DataType, InputImageType, nDims, MType, VType >::runDeformation | ( | const std::string | defName, | |
| typename DeformationType::deformationIn *const | i, | |||
| std::stringstream *const | s = NULL | |||
| ) | [virtual] |
Public member. Used by a behaviour to execute a particular deformation by name.
Runs a deformation on the attached geometric layer.
| args | The marshaled argument list. |
Implements mial::Physics< Type, nDims, MType, VType >.
Definition at line 226 of file Phys_LevelSet.cxx.
References mial::Physics< Type, nDims, MType, VType >::Error::deformationError, mial::Physics< Type, nDims, MType, VType >::Error::deformationNumber, and mial::Physics< Type, nDims, MType, VType >::Error::msg.
| void mial::Phys_LevelSet< DataType, InputImageType, nDims, MType, VType >::setExternalForces | ( | void * | ) | [virtual] |
Public pure virtual function for setting the external forces used during simulations of the deformation dynamics.
The external force image is used to provide external forces to the organism during the deformation process. These could be gradient based, or a distance transform from a point of interest, etc.
| img | The image to be used as an external force. Derived classes must publicly define the expected type, and then typecast the input to this function. |
Implements mial::Physics< Type, nDims, MType, VType >.
Definition at line 342 of file Phys_LevelSet.cxx.
| virtual void mial::Phys_LevelSet< DataType, InputImageType, nDims, MType, VType >::setInput | ( | typename InputImageType::ConstPointer | img | ) | [inline, virtual] |
Set the layer's input image.
| img | the image to be used by the layer for gradient magnitude calculations. |
Definition at line 97 of file Phys_LevelSet.h.
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