1. Ghassan Hamarneh and Rafeef Abugharbieh, editors. Proceedings of the First MICCAI Workshop on Analysis of Functional Medical Images, Workshop held in conjunction with the 2008 International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI). New York, NY, USA, 9 2008. Keyword(s): Functional/Molecular/Dynamic Imaging, Functional/Molecular/Dynamic Imaging, Spatio-Temporal.

1. Zhe Fang. Visualization and Exploration of Time-Varying and Diffusion Tensor Medical Image Data Sets. Master's Thesis, School of Computing Science, Faculty of Applied Sciences, Simon Fraser University, January 2008.



2. Omer Ishaq. Algorithms for Image Analysis of Corpus Callosum Degeneration for Multiple Sclerosis. Master's Thesis, School of Computing Science, Faculty of Applied Sciences, Simon Fraser University, January 2008.



3. Aaron Ward. Computational Intelligence Supporting Anatomical Shape Analysis and Computer-Aided Diagnosis. Doctoral Thesis, School of Computing Science, Faculty of Applied Sciences, Simon Fraser University, 2008.

1. Miranda Poon, Ghassan Hamarneh, and Rafeef Abugharbieh. Efficient Interactive 3D Livewire Segmentation of Objects with Arbitrary Topologies. Computerized Medical Imaging and Graphics (CMIG), 32(8):639-650, 2008. Keyword(s): Segmentation, Software and Tools, User Interaction, Graph based.



2. Andy Rova, Anna Celler, and Ghassan Hamarneh. NMQC: A NEMA-Compliant Software Application for Gamma Camera Quality Control. Journal of Digital Imaging, 21(2):243-255, 2008. Keyword(s): Imaging, Software and Tools.



3. Lisa Y. W. Tang, Ghassan Hamarneh, and Anna Celler. Validation of Mutual Information-Based Registration of CT and Bone SPECT Images in Dual-isotope Studies. Computer Methods and Programs in Biomedicine, 92(2):173-185, 2008. Keyword(s): Imaging, Registration and Matching, Validation, Multimodal, Functional/Molecular/Dynamic Imaging.



4. Aaron Ward, Ghassan Hamarneh, and Mark Schweitzer. 3D Bicipital Groove Shape Analysis and Relationship to Tendopathy. Journal of Digital Imaging, 21(2):219-234, 2008. Keyword(s): Shape Modelling and Analysis, Machine Learning.

1. Ghassan Hamarneh, Preet Jassi, and Lisa Y. W. Tang. Simulation of Ground-Truth Validation Data via Physically- and Statistically-based Warps. In Lecture Notes in Computer Science, Medical Image Computing and Computer-Assisted Intervention (MICCAI), volume 5241, pages 459-467, 2008. Keyword(s): Registration and Matching, Segmentation, Shape Modelling and Analysis, Software and Tools, Validation, Synthesis/Simulation/Augmentation, Physical Modelling.



2. William Ma, Ghassan Hamarneh, Greg Mori, Katie Dinelle, and Vesna Sossi. Motion Estimation for Functional Medical Imaging Studies using a Stereo Video Head Pose Tracking System. In IEEE Medical Imaging / Nuclear Science Conference (IEEE MIC/NSS), pages 4086-4090, 2008. Keyword(s): Tracking, Registration and Matching.



3. Manku Rana, Ghassan Hamarneh, and James Wakeling. Automated tracking of muscle fascicle orientation in B-mode ultrasound images. In North American Congress on Biomechanics (NACB), 2008. Keyword(s): Shape Modelling and Analysis, Tracking.



4. Ahmed Saad, Ghassan Hamarneh, Torsten Moeller, and Ben Smith. Kinetic Modeling based Probabilistic Segmentation for Molecular Images. In Lecture Notes in Computer Science, Medical Image Computing and Computer-Assisted Intervention (MICCAI), volume 5241, pages 244-252, 2008. Keyword(s): Functional/Molecular/Dynamic Imaging, Segmentation, Uncertainty, Graph based.



5. Lilong Shi, Brian Funt, and Ghassan Hamarneh. Quaternion Color Curvature. In Color Imaging (IS&T/SID CI), pages 338-341, 2008. Keyword(s): Processing, Color/Multichannel/Vector-valued, Anatomical Trees and Tubular Structures.



6. Ben Smith, Ahmed Saad, Ghassan Hamarneh, and Torsten Moeller. Recovery of Dynamic PET Regions via Simultaneous Segmentation and Deconvolution. In Ghassan Hamarneh and Rafeef Abugharbieh, editors, Medical Image Computing and Computer-Assisted Intervention Workshop on Analysis of Functional Medical Image Data (MICCAI functional), pages 33-40, 2008. Keyword(s): Functional/Molecular/Dynamic Imaging, Segmentation.



7. Lisa Y. W. Tang and Ghassan Hamarneh. SMRFI: Shape Matching via Registration of Vector-Valued Feature Images. In IEEE Computer Vision and Pattern Recognition (IEEE CVPR), pages 1-8, 2008. Keyword(s): Registration and Matching.



8. Lisa Y. W. Tang, Ghassan Hamarneh, and Anna Celler. Increasing Accuracy of Mutual Information-Based Registration of Tumor SPECT and CT Images with Dual-isotope Studies. In Society for Imaging Informatics in Medicine Annual Meeting (SIIM), pages 59-61, 2008. Keyword(s): Registration and Matching, Multimodal, Functional/Molecular/Dynamic Imaging.

1. Aaron Ward and Ghassan Hamarneh. GMAT: The Groupwise Medial Axis Transform for Fuzzy Skeletonization and Intelligent Pruning. Technical report TR 2008-07, School of Computing Science, Simon Fraser University, Burnaby, BC, Canada, 3 2008. Keyword(s): Shape Modelling and Analysis, Medial-based Shape Representation.

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