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Publications about 'Validation'
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Articles in journal, book chapters
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Ben Cardoen,
Hanene Ben Yedder,
Sieun Lee,
Ivan Robert Nabi,
and Ghassan Hamarneh.
DataCurator.jl: Efficient, portable, and reproducible validation, curation, and transformation of large heterogeneous datasets using human-readable recipes compiled into machine verifiable templates.
BioInformatics Advances,
3(1-5):000-000,
2023.
Keyword(s): Microscopy,
Processing,
Single Molecule Localization,
Super Resolution Microscopy,
Software and Tools,
Reproducibility.
[bibtex-key = bioinfadv2023]
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Roja Zakariaee,
Ghassan Hamarneh,
Colin J. Brown,
and Ingrid Spadinger.
Validation of non-rigid point-set registration methods using a porcine bladder pelvic phantom.
Physics in Medicine and Biology (PMB),
61(2):825-854,
2015.
Keyword(s): Registration and Matching,
Brachytherapy.
[bibtex-key = pmb2015]
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Preet Jassi and Ghassan Hamarneh.
VascuSynth: Vascular Tree Synthesis Software.
Insight Journal,
January-June:1-12,
2011.
Keyword(s): Segmentation,
Validation,
Shape Modelling and Analysis,
Software and Tools,
Anatomical Trees and Tubular Structures,
Synthesis/Simulation/Augmentation,
Datasets.
[bibtex-key = ij2011]
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Ghassan Hamarneh and Preet Jassi.
VascuSynth: Simulating Vascular Trees for Generating Volumetric Image data with Ground Truth Segmentation and Tree Analysis.
Computerized Medical Imaging and Graphics (CMIG),
34(8):605-616,
2010.
Keyword(s): Segmentation,
Validation,
Shape Modelling and Analysis,
Software and Tools,
Anatomical Trees and Tubular Structures,
Synthesis/Simulation/Augmentation.
[bibtex-key = cmig2010]
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Lisa Y. W. Tang,
Ghassan Hamarneh,
and Anna Celler.
Dual-isotope Acquisition for CT-SPECT Registration of Infection Studies.
Journal of Digital Imaging,
23(3):258-267,
2010.
Keyword(s): Imaging,
Registration and Matching,
Validation,
Multimodal,
Functional/Molecular/Dynamic Imaging.
[bibtex-key = jdi2010]
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Lisa Y. W. Tang,
Ghassan Hamarneh,
and Anna Celler.
Validation of Mutual Information-Based Registration of CT and Bone SPECT Images in Dual-isotope Studies.
Computer Methods and Programs in Biomedicine,
92(2):173-185,
2008.
Keyword(s): Imaging,
Registration and Matching,
Validation,
Multimodal,
Functional/Molecular/Dynamic Imaging.
[bibtex-key = cmpb2008]
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Roja Zakariaee,
Ghassan Hamarneh,
Colin J. Brown,
and Ingrid Spadinger.
Phantom Validation of a Point-Set Deformable Registration Method using Pig Bladder.
In World Congress on Medical Physics and Biomedical Engineering (WCMPBE),
2015.
Keyword(s): Registration and Matching,
Brachytherapy.
[bibtex-key = wcmpbe2015]
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Brian G. Booth and Ghassan Hamarneh.
DTI-DeformIt: Generating Ground-Truth Validation Data for Diffusion Tensor Image Analysis Tasks.
In IEEE International Symposium on Biomedical Imaging (IEEE ISBI),
pages 730-733,
2014.
Keyword(s): Diffusion MRI/Tensor-valued,
Synthesis/Simulation/Augmentation,
Software and Tools,
Validation,
Physical Modelling.
[bibtex-key = isbi2014b]
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Ghassan Hamarneh,
Preet Jassi,
and Lisa Y. W. Tang.
Simulation of Ground-Truth Validation Data via Physically- and Statistically-based Warps.
In Lecture Notes in Computer Science, Medical Image Computing and Computer-Assisted Intervention (MICCAI),
volume 5241,
pages 459-467,
2008.
Keyword(s): Registration and Matching,
Segmentation,
Shape Modelling and Analysis,
Software and Tools,
Validation,
Synthesis/Simulation/Augmentation,
Physical Modelling.
[bibtex-key = miccai2008b]
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Ben Cardoen,
Hanene Ben Yedder,
Sieun Lee,
Ivan Robert Nabi,
and Ghassan Hamarneh.
DataCurator.jl: Efficient, portable, and reproducible validation, curation, and transformation of large heterogeneous datasets using human-readable recipes compiled into machine verifiable templates.
Technical report techrxiv:22060118,
2 2023.
Keyword(s): Microscopy,
Processing,
Single Molecule Localization,
Super Resolution Microscopy,
Software and Tools,
Reproducibility.
[bibtex-key = techrxiv_22060118]
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Ivan Robert Nabi,
Ben Cardoen,
Ismail M. Khater,
Guang Gao,
Timothy H. Wong,
and Ghassan Hamarneh.
AI-based analysis of super-resolution microscopy: Biological discovery in the absence of ground truth.
Technical report arxiv.2305.17193,
5 2023.
Keyword(s): Machine Learning,
Deep Learning,
Weak Supervision,
Super Resolution Microscopy,
Validation.
[bibtex-key = arxiv:2305.17193]
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Shawn Andrews and Ghassan Hamarneh.
Multi-Region Probabilistic Dice Similarity Coefficient using the Aitchison Distance and Bipartite Graph Matching.
Technical report arxiv:1509.07244,
9 2015.
Keyword(s): Segmentation,
Validation,
Graph based,
Registration and Matching.
[bibtex-key = arxiv:1509.07244]
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Last modified: Thu Aug 1 12:06:05 2024
Author: hamarneh.
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