Modeling-Related Stuff

• Code from the Clark-Mangel book. This link (which is the one from the book) seems to have changed to not include the promised code. I've mirrored what I have here:
  • patch selection for True BASIC
  • patch selection for C++, sample output
• The Mangel-Clark patch selection model in Python (requires Python and the numarray module)
  • Sample output
• Python Programming in Windows
• Python Programming on Mac OS X
• How to Think Like a Computer Scientist: Learning with Python
• Files for Alejandro's model (requires password—email Greg if you'd like it.)

Computer Models in Biology Workshops

• Week 1: Dynamic Modeling
  • Week 1 Powerpoints from Bernie
  • Week 1 Powerpoints from Greg
  • Clark-Mangel patch selection
  • Alejandro's Seal Foraging, parameter file (required)
• Week 2: Python and Monte Carlo Simulation
  • Week 2 notes
  • Week 2 notes part 2: code
  • Patch selection: parameters, dynamic program, Monte Carlo simulation, Sample Monte Carlo output
  • Seal foraging: parameters, dynamic program, Monte Carlo simulation, Readable Monte Carlo output, Importable Monte Carlo output
• Week 3: Genetic Algorithms
  • Slides on Genetic Algorithms
  • Slides on the false-marking GA
• Week 4: Wrap up
  • Week 4 notes
  • Code and other files from week 4